ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 80.00 0.20 0.24 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 1459.00 3.66 4.35 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 27941.00 70.15 83.29 83.62 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 383.00 0.96 1.14 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 310.00 3.33 0.92 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 37429.00 78.12 111.58 92.01 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 83.00 0.95 0.25 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 176.00 8.35 0.52 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 218.00 10.34 0.65 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 664.00 31.48 1.98 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 21.00 1.00 0.06 44.68 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 321.00 0.05 0.96 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 514.00 25.10 1.53 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 741.00 29.74 2.21 41.44 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 181.00 7.26 0.54 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 1047.00 42.01 3.12 58.56 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 2106.00 40.60 6.28 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 28.00 0.54 0.08 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 894.00 59.76 2.67 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 719.00 65.42 2.14 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 673.00 45.41 2.01 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 67.00 0.21 0.20 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 47.00 0.15 0.14 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 202.00 0.63 0.60 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 2098.00 6.54 6.25 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA liver (Tissue)