ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 312.00 0.97 0.93 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 87.00 0.27 0.26 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 4625.00 0.71 13.79 93.21 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 731.00 0.11 2.18 71.18 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 354.00 0.05 1.06 60.93 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 687.00 7.17 2.05 28.7 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 986.00 89.88 2.94 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 970.00 50.26 2.89 96.04 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 248.00 87.94 0.74 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 317.00 0.67 0.94 79.25 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 83.00 0.18 0.25 20.75 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 18754.00 39.88 55.91 66.74 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 8604.29 41.76 25.65 57.52 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 432.00 2.10 1.29 72.12 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 11995.22 58.22 35.76 71.72 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 94440.00 90.02 281.53 94.42 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 138.00 7.80 0.41 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 2540.00 25.82 7.57 58.18 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 98.00 0.03 0.29 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 404.00 0.23 1.20 44.69 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 899.00 37.93 2.68 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 564.00 19.28 1.68 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 344650.00 97.67 1027.40 99.8 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 240.00 1.87 0.72 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 5819.00 45.44 17.35 77.35 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA liver (Tissue)