ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 34.00 0.01 0.10 97.14 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 293.00 10.07 0.87 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 384.00 13.20 1.14 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 445.00 15.61 1.33 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 50.00 0.54 0.15 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 186.00 0.04 0.55 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 153.00 0.03 0.46 15.99 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 664.00 18.51 1.98 68.38 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 560.00 15.61 1.67 45.75 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 218.00 7.83 0.65 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 94047.00 53.21 280.35 90.2 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1012.00 0.57 3.02 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 12.00 1.90 0.04 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 68.00 3.29 0.20 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 14.00 0.04 0.04 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 664.00 1.22 1.98 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 85.00 0.16 0.25 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 49.00 0.09 0.15 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1784.00 3.29 5.32 92.53 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 2484.00 4.58 7.40 76.69 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 528.00 0.97 1.57 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 3303.00 33.57 9.85 56.53 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 457.00 4.64 1.36 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 377.00 3.81 1.12 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 33.00 0.08 0.10 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA liver (Tissue)