ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 17593.00 30.34 52.44 90.87 SNHG14-241 lncRNA liver (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 250660.00 95.93 747.22 100.0 MEG8-228 lncRNA liver (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 3615.00 23.07 10.78 100.0 SNHG14-254 lncRNA liver (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 3658.00 12.73 10.90 100.0 SNHG14-261 lncRNA liver (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 11082.00 38.56 33.04 89.14 SNHG14-261 lncRNA liver (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 414.00 2.70 1.23 100.0 LIMD1-AS1-204 lncRNA liver (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 49.00 0.32 0.15 100.0 LIMD1-AS1-204 lncRNA liver (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 3589.00 23.45 10.70 88.62 LIMD1-AS1-204 lncRNA liver (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 10185.00 70.93 30.36 95.31 MIR99AHG-262 lncRNA liver (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1539.00 10.72 4.59 100.0 MIR99AHG-262 lncRNA liver (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 759.00 4.09 2.26 100.0 SNHG14-266 lncRNA liver (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 849.00 55.82 2.53 100.0 SNHG14-270 lncRNA liver (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 533.00 0.59 1.59 100.0 SNHG14-275 lncRNA liver (Tissue)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 1.00 0.35 0.00 100.0 MIR9-2HG-225 lncRNA liver (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 93.00 32.29 0.28 92.08 MIR9-2HG-225 lncRNA liver (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 3802.00 16.56 11.33 100.0 MEG8-233 lncRNA liver (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 10084.00 43.93 30.06 100.0 MEG8-233 lncRNA liver (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 2897.00 5.36 8.64 100.0 SNHG14-278 lncRNA liver (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 37263.00 68.96 111.08 92.99 SNHG14-278 lncRNA liver (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 14520.00 40.06 43.28 100.0 MEG8-234 lncRNA liver (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 4622.00 12.75 13.78 100.0 MEG8-234 lncRNA liver (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 2063.00 77.35 6.15 100.0 SNHG17-252 lncRNA liver (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 8139.00 37.83 24.26 70.72 SNHG14-288 lncRNA liver (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 10317.00 47.95 30.75 84.88 SNHG14-288 lncRNA liver (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 662.00 4.20 1.97 100.0 SNHG14-295 lncRNA liver (Tissue)