ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 690.00 60.26 2.06 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 993.00 29.41 2.96 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 150.00 5.61 0.45 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 39208.00 95.80 116.88 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 1939.00 84.82 5.78 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 19885.00 63.15 59.28 98.66 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 677.00 2.15 2.02 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 272.00 0.08 0.81 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 849.00 34.25 2.53 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 400.00 3.46 1.19 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 61.00 1.88 0.18 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 234.00 7.21 0.70 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 45.00 1.39 0.13 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 10.00 4.46 0.03 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA liver (Tissue)