ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 9584.00 13.02 28.57 100.0 ENST00000651540 lncRNA liver (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 10582.00 14.38 31.54 60.13 ENST00000651540 lncRNA liver (Tissue)
ENST00000651540.1 ENST00000651540.1_1_88_+ 1–88 1.00 0.00 0.00 100.0 ENST00000651540 lncRNA liver (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 6546.00 3.32 19.51 100.0 MIRLET7A1HG-203 lncRNA liver (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 130508.00 89.80 389.04 100.0 MEG8-225 lncRNA liver (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 361974.00 74.96 1079.04 100.0 SNHG29-232 lncRNA liver (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 437.00 0.09 1.30 100.0 SNHG29-232 lncRNA liver (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 1591.00 0.33 4.74 100.0 SNHG29-232 lncRNA liver (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 4706.00 0.97 14.03 100.0 SNHG29-232 lncRNA liver (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 36963.00 7.65 110.19 100.0 SNHG29-232 lncRNA liver (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 63501.00 13.15 189.30 100.0 SNHG29-232 lncRNA liver (Tissue)
ENST00000654356.2 ENST00000654356.2_463_540_+ 463–540 4.00 0.00 0.01 100.0 SNHG29-232 lncRNA liver (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 456.00 0.45 1.36 100.0 SNHG14-234 lncRNA liver (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 32827.00 32.16 97.86 94.87 SNHG14-234 lncRNA liver (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 629.00 0.62 1.88 100.0 SNHG14-234 lncRNA liver (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 6169.00 6.04 18.39 100.0 SNHG14-234 lncRNA liver (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 10861.00 10.64 32.38 100.0 SNHG14-234 lncRNA liver (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 13526.00 13.25 40.32 94.63 SNHG14-234 lncRNA liver (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 1426.00 2.79 4.25 24.78 ENST00000655317 lncRNA liver (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 11519.00 22.54 34.34 100.0 ENST00000655317 lncRNA liver (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 8239.00 16.12 24.56 74.52 ENST00000655317 lncRNA liver (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 2550.00 4.99 7.60 100.0 ENST00000655317 lncRNA liver (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 1718.00 3.03 5.12 58.78 LINC01962-202 lncRNA liver (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 49430.00 87.09 147.35 100.0 LINC01962-202 lncRNA liver (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 603.00 1.06 1.80 100.0 LINC01962-202 lncRNA liver (Tissue)