ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 30715.00 28.35 82.78 79.99 NOP56-219 retained intron urinary bladder (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 1461.00 1.35 3.94 100.0 NOP56-219 retained intron urinary bladder (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 465.00 0.43 1.25 100.0 NOP56-219 retained intron urinary bladder (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 47293.00 43.66 127.45 76.1 NOP56-219 retained intron urinary bladder (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 2168.00 11.65 5.84 34.5 RNA5-8SN2-201 rRNA urinary bladder (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 131.34 0.71 0.35 41.56 RNA5-8SN2-201 rRNA urinary bladder (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 18.00 0.10 0.05 100.0 RNA5-8SN2-201 rRNA urinary bladder (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 175.00 0.94 0.47 100.0 RNA5-8SN2-201 rRNA urinary bladder (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 101.00 0.54 0.27 100.0 RNA5-8SN2-201 rRNA urinary bladder (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 6758.00 36.33 18.21 75.71 RNA5-8SN2-201 rRNA urinary bladder (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 195.83 1.05 0.53 61.97 RNA5-8SN2-201 rRNA urinary bladder (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 2.00 66.67 0.01 100.0 MIR7974-201 miRNA urinary bladder (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 579.00 29.59 1.56 100.0 MIR376A1-201 miRNA urinary bladder (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 672.00 34.34 1.81 100.0 MIR376A1-201 miRNA urinary bladder (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 801.00 0.34 2.16 100.0 U2.3-201 snRNA urinary bladder (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 997.20 0.42 2.69 44.7 U2.3-201 snRNA urinary bladder (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 158034.00 66.54 425.90 99.05 U2.3-201 snRNA urinary bladder (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 4.00 0.00 0.01 100.0 U2.3-201 snRNA urinary bladder (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 26992.00 11.36 72.74 77.72 U2.3-201 snRNA urinary bladder (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 5341.00 2.25 14.39 64.89 U2.3-201 snRNA urinary bladder (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 2058.00 0.87 5.55 79.55 U2.3-201 snRNA urinary bladder (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 1262.40 0.53 3.40 56.58 U2.3-201 snRNA urinary bladder (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 1174.00 0.49 3.16 100.0 U2.3-201 snRNA urinary bladder (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 46.00 0.02 0.12 100.0 U2.3-201 snRNA urinary bladder (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 99.00 0.04 0.27 100.0 U2.3-201 snRNA urinary bladder (Tissue)