ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 6586.00 42.76 17.75 72.96 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 2786.00 74.93 7.51 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 415.00 40.25 1.12 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 372.00 9.88 1.00 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 84483.00 97.44 227.68 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 5327.00 90.94 14.36 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 3803.00 49.84 10.25 98.14 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 92.00 1.21 0.25 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 367.00 0.04 0.99 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 560.00 21.65 1.51 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 368.00 5.31 0.99 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 32.00 1.33 0.09 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 279.00 11.61 0.75 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 335.00 13.94 0.90 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 2.00 0.70 0.01 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA urinary bladder (Tissue)