ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 5016.00 47.01 9.78 94.66 SNHG14-341 lncRNA tongue (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 1304.00 31.35 2.54 100.0 NCL-211 retained intron tongue (Tissue)
ENST00000677786.1 ENST00000677786.1_3513_3605_+ 3513–3605 1.00 0.16 0.00 100.0 NCL-216 retained intron tongue (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 1169.00 27.36 2.28 100.0 FMN2-209 protein coding CDS not defined tongue (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 12.00 0.08 0.02 100.0 LINC02739-203 lncRNA tongue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 186.00 1.28 0.36 21.96 LINC02739-203 lncRNA tongue (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 3878.00 26.77 7.56 100.0 LINC02739-203 lncRNA tongue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 686.00 4.74 1.34 100.0 LINC02739-203 lncRNA tongue (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 134.00 0.93 0.26 100.0 LINC02739-203 lncRNA tongue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 661.00 4.56 1.29 78.04 LINC02739-203 lncRNA tongue (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 82.00 79.61 0.16 100.0 MIR124-1HG-216 lncRNA tongue (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 1129.00 29.40 2.20 100.0 SNHG10-212 lncRNA tongue (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 40475.11 36.33 78.89 38.7 SNHG19-202 lncRNA tongue (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 63482.05 56.98 123.73 68.75 SNHG19-202 lncRNA tongue (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 17.71 0.02 0.03 93.24 SNHG19-202 lncRNA tongue (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 2.16 0.00 0.00 72.05 SNHG19-202 lncRNA tongue (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 4600.00 19.40 8.97 100.0 MIR222HG-206 lncRNA tongue (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 12360.00 52.11 24.09 77.15 MIR222HG-206 lncRNA tongue (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 111.00 0.47 0.22 100.0 MIR222HG-206 lncRNA tongue (Tissue)
ENST00000688371.3 ENST00000688371.3_313_335_+ 313–335 1.00 1.04 0.00 20.0 MIR302CHG-205 lncRNA tongue (Tissue)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 7.56 7.88 0.01 54.0 MIR302CHG-205 lncRNA tongue (Tissue)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 4.00 4.17 0.01 80.0 MIR302CHG-205 lncRNA tongue (Tissue)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 5.32 5.54 0.01 44.34 MIR302CHG-205 lncRNA tongue (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 10.00 10.42 0.02 100.0 MIR302CHG-205 lncRNA tongue (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 22.00 22.92 0.04 100.0 MIR302CHG-205 lncRNA tongue (Tissue)