ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1783.00 0.11 3.48 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 3180.00 0.19 6.20 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 2548.00 0.15 4.97 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 96836.00 44.98 188.74 100.0 SNHG14-315 lncRNA tongue (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 25662.00 11.92 50.02 85.48 SNHG14-315 lncRNA tongue (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 52868.00 24.56 103.04 85.64 SNHG14-315 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2334.00 0.73 4.55 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 109168.72 34.37 212.78 48.09 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 359.00 0.11 0.70 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 682.00 0.21 1.33 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 128823.29 40.56 251.09 53.86 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 27273.00 8.59 53.16 90.37 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 903.00 0.28 1.76 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 6412.00 2.02 12.50 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 124.00 0.04 0.24 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 1.00 0.00 0.00 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 4878.00 1.54 9.51 98.41 SNHG5-273 lncRNA tongue (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 743.00 5.48 1.45 79.04 SNHG14-323 lncRNA tongue (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 61629.00 0.78 120.12 100.0 MEG8-251 lncRNA tongue (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 28141.00 0.36 54.85 57.21 MEG8-251 lncRNA tongue (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 7369014.00 93.31 14362.81 99.14 MEG8-251 lncRNA tongue (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 27102.00 0.34 52.82 60.7 MEG8-251 lncRNA tongue (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 83809.00 1.06 163.35 73.78 MEG8-251 lncRNA tongue (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 21297.00 58.80 41.51 84.9 SNHG14-336 lncRNA tongue (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 11350.00 31.34 22.12 62.44 SNHG14-336 lncRNA tongue (Tissue)