ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 7.00 7.95 0.01 100.0 HCN2-201 protein coding tongue (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 218.00 57.98 0.42 100.0 SLC49A4-201 protein coding tongue (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 67.00 1.09 0.13 100.0 ATP5MC3-201 protein coding tongue (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 261.00 93.88 0.51 100.0 CDC25A-201 protein coding tongue (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 5.00 7.46 0.01 100.0 RUNX3-201 protein coding tongue (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 122.00 76.25 0.24 100.0 BLOC1S4-201 protein coding tongue (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 243.00 4.25 0.47 100.0 ATAD5-201 protein coding tongue (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 3438.00 66.29 6.70 100.0 SLITRK5-201 protein coding tongue (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 1674.00 58.55 3.26 100.0 HASPIN-201 protein coding tongue (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 631.00 53.98 1.23 100.0 PRR14L-201 protein coding tongue (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 8116.00 97.69 15.82 100.0 ATG101-201 protein coding tongue (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 4389.00 86.11 8.55 100.0 PRICKLE1-201 protein coding tongue (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 2198308.00 96.88 4284.68 98.99 MIR133A2-201 miRNA tongue (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 110.00 30.90 0.21 100.0 PBLD-204 protein coding tongue (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 1041621.00 91.11 2030.20 99.06 MIRLET7BHG-201 lncRNA tongue (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 47448.00 4.15 92.48 91.38 MIRLET7BHG-201 lncRNA tongue (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 16695.00 96.64 32.54 98.41 MIR375-201 miRNA tongue (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 297.00 1.72 0.58 42.13 MIR375-201 miRNA tongue (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 8556.00 50.96 16.68 100.0 MIR30E-201 miRNA tongue (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 5116.00 30.47 9.97 100.0 MIR30E-201 miRNA tongue (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 546.00 54.27 1.06 100.0 MIR29A-201 miRNA tongue (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 1959.00 84.29 3.82 100.0 MIR345-201 miRNA tongue (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 120462.00 96.46 234.79 100.0 MIR16-2-201 miRNA tongue (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 700.00 3.20 1.36 100.0 MIR340-201 miRNA tongue (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 20093.00 91.82 39.16 100.0 MIR340-201 miRNA tongue (Tissue)