ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 3912.00 4.64 7.62 86.13 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 451.00 0.54 0.88 100.0 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 2461.00 2.92 4.80 47.03 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 3136.00 3.72 6.11 61.32 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 4551.00 5.40 8.87 77.01 SNHG14-224 lncRNA tongue (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 3127.04 18.68 6.09 67.64 5S_rRNA.20-201 rRNA pseudogene tongue (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 754.00 4.94 1.47 100.0 HSPA9-211 retained intron tongue (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 3400.00 22.28 6.63 42.99 HSPA9-211 retained intron tongue (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 607202.00 93.21 1183.49 100.0 DNM3OS-205 lncRNA tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 763.00 0.08 1.49 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 180.00 0.02 0.35 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 7200.00 0.73 14.03 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 2237.00 0.23 4.36 75.09 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 28672.00 2.91 55.88 94.65 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 67.00 0.01 0.13 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 147.00 0.01 0.29 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 356.00 0.04 0.69 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 542460.00 55.05 1057.30 99.77 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 2121.00 0.22 4.13 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 6574.00 0.67 12.81 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1409.00 0.14 2.75 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 2617.00 0.27 5.10 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 3443.00 0.35 6.71 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 2950.00 0.30 5.75 100.0 GAS5-230 retained intron tongue (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 825.00 0.08 1.61 100.0 GAS5-230 retained intron tongue (Tissue)