ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 18.00 0.01 0.04 100.0 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 55.00 0.02 0.11 100.0 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 348.00 0.14 0.68 100.0 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 16515.50 6.43 32.19 47.13 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 12349.91 4.81 24.07 52.62 U2.3-201 snRNA tongue (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 2687.00 1.07 5.24 100.0 U2.6-201 snRNA tongue (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 3351.00 1.01 6.53 47.46 ENST00000619323 lncRNA tongue (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 317476.00 96.02 618.79 98.42 ENST00000619323 lncRNA tongue (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 142.00 8.17 0.28 100.0 SCARNA4-202 scaRNA tongue (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 2360.00 71.28 4.60 100.0 ENST00000625572 miRNA tongue (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 37361.00 92.37 72.82 100.0 ENST00000628177 snoRNA tongue (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 7405.00 95.50 14.43 100.0 ENST00000630615 snoRNA tongue (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 189.00 36.00 0.37 100.0 DMRT2-209 protein coding tongue (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 82.00 15.62 0.16 100.0 DMRT2-209 protein coding tongue (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 1094.00 11.74 2.13 100.0 SNORD98-201 snoRNA tongue (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 6206.00 66.60 12.10 100.0 SNORD98-201 snoRNA tongue (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 149365.32 44.30 291.13 47.97 MIR106AHG-201 lncRNA tongue (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 843.86 0.25 1.64 20.05 MIR106AHG-201 lncRNA tongue (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 292.00 0.09 0.57 100.0 MIR106AHG-201 lncRNA tongue (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 3182.20 0.94 6.20 75.6 MIR106AHG-201 lncRNA tongue (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 6335.00 6.59 12.35 100.0 MEG8-222 lncRNA tongue (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 36355.00 37.82 70.86 100.0 MEG8-222 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 8100.00 9.61 15.79 95.98 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 20116.00 23.88 39.21 86.49 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 14252.00 16.92 27.78 100.0 SNHG14-224 lncRNA tongue (Tissue)