ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 2287.00 25.26 4.46 100.0 RPS2-215 retained intron tongue (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 34265.00 85.96 66.79 87.53 ENST00000548801 lncRNA tongue (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 16.00 0.17 0.03 100.0 ENST00000554988 lncRNA tongue (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 1243.00 13.27 2.42 100.0 ENST00000554988 lncRNA tongue (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 2352.00 25.10 4.58 100.0 ENST00000554988 lncRNA tongue (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 1443.00 1.72 2.81 100.0 SNHG14-220 retained intron tongue (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 340.00 0.41 0.66 100.0 SNHG14-220 retained intron tongue (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 37283.00 44.55 72.67 100.0 SNHG14-220 retained intron tongue (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 38843.00 46.41 75.71 100.0 SNHG14-220 retained intron tongue (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 9078.00 99.70 17.69 100.0 TEKT4P2-201 transcribed unprocessed pseudogene tongue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 122326.00 88.46 238.42 98.14 RPL4-202 retained intron tongue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 248.00 0.18 0.48 100.0 RPL4-202 retained intron tongue (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 51.00 0.04 0.10 100.0 RPL4-202 retained intron tongue (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 2017.00 1.46 3.93 100.0 RPL4-202 retained intron tongue (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 734.00 0.53 1.43 100.0 RPL4-202 retained intron tongue (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 2.00 0.01 0.00 100.0 ENST00000563103 lncRNA tongue (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 53.00 0.42 0.10 100.0 RPL4-207 retained intron tongue (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 8435.00 66.22 16.44 100.0 RPL4-207 retained intron tongue (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 6835.00 11.77 13.32 72.19 ENST00000565336 lncRNA tongue (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 41832.00 72.05 81.53 93.05 ENST00000565336 lncRNA tongue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 188776.00 78.16 367.94 84.78 RBMX-210 retained intron tongue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 1772.00 0.73 3.45 100.0 RBMX-210 retained intron tongue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 258.00 0.11 0.50 100.0 RBMX-210 retained intron tongue (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 3102.00 1.28 6.05 100.0 RBMX-210 retained intron tongue (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 1360.00 10.17 2.65 100.0 RPL4-214 retained intron tongue (Tissue)