ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 65611.00 40.60 127.88 96.13 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 4668.00 2.89 9.10 95.17 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 112.00 0.07 0.22 100.0 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1377.00 0.85 2.68 44.75 RNY4-201 misc RNA tongue (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1301.00 80.66 2.54 87.14 MIR3142HG-201 lncRNA tongue (Tissue)
ENST00000521127.2 ENST00000521127.2_328_407_+ 328–407 1.00 0.01 0.00 100.0 SNHG6-204 retained intron tongue (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 6664.00 70.90 12.99 100.0 SNHG6-204 retained intron tongue (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 69031.00 43.73 134.55 100.0 MIR151A-201 miRNA tongue (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 68082.00 43.13 132.70 81.68 MIR151A-201 miRNA tongue (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 6337.00 97.93 12.35 100.0 DENND3-221 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 3842.00 1.50 7.49 83.34 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 6.00 0.00 0.01 50.0 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 71.00 0.03 0.14 73.2 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 8.00 0.00 0.02 100.0 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 6.00 0.00 0.01 50.0 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 785.00 0.31 1.53 100.0 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 1431.00 0.56 2.79 100.0 WDR74-204 protein coding tongue (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 34.00 0.01 0.07 100.0 WDR74-204 protein coding tongue (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 9221.00 73.18 17.97 100.0 HSPA8-211 retained intron tongue (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 808.00 14.41 1.57 100.0 SCARNA9-201 lncRNA tongue (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 67196.00 88.97 130.97 100.0 TAF1D-215 retained intron tongue (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 507.00 0.67 0.99 100.0 TAF1D-215 retained intron tongue (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 3414.00 31.10 6.65 100.0 HSPA8-215 retained intron tongue (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 4526.00 41.23 8.82 100.0 HSPA8-215 retained intron tongue (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 8.00 0.07 0.02 100.0 HSPA8-215 retained intron tongue (Tissue)