ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 7101.00 53.08 13.84 100.0 RPL4-214 retained intron tongue (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 47338.32 51.24 92.27 68.26 POLG-DT-202 lncRNA tongue (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 15483.29 16.76 30.18 24.33 POLG-DT-202 lncRNA tongue (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 1855.00 2.01 3.62 100.0 POLG-DT-202 lncRNA tongue (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 2155.00 31.98 4.20 100.0 ENST00000570843 lncRNA tongue (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 3130.00 64.78 6.10 100.0 MIR497HG-207 lncRNA tongue (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 1747156.00 99.42 3405.35 99.79 MIR22HG-212 lncRNA tongue (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 341.00 0.27 0.66 40.12 SNORD53B-201 snoRNA tongue (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 116877.00 93.07 227.80 95.71 SNORD53B-201 snoRNA tongue (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 509.00 0.41 0.99 59.88 SNORD53B-201 snoRNA tongue (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 2938.00 89.93 5.73 100.0 ENST00000578036 lncRNA tongue (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 4748.00 87.01 9.25 100.0 RPL23A-207 protein coding tongue (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 1095.00 82.33 2.13 100.0 MIR744-201 miRNA tongue (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 11320.00 68.44 22.06 100.0 MIR378C-201 miRNA tongue (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 5515.00 64.89 10.75 72.88 MIR142HG-201 lncRNA tongue (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 59.00 0.69 0.11 100.0 MIR142HG-201 lncRNA tongue (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 288.00 3.39 0.56 9.6 MIR142HG-201 lncRNA tongue (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 170.00 0.67 0.33 100.0 SNORD3C-201 snoRNA tongue (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 133215.00 79.96 259.65 90.08 RPL23A-208 retained intron tongue (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 256.06 0.15 0.50 55.91 RPL23A-208 retained intron tongue (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 206.80 0.12 0.40 55.44 RPL23A-208 retained intron tongue (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 29101.00 17.47 56.72 90.98 RPL23A-208 retained intron tongue (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 14882.00 0.65 29.01 100.0 MIR133A1HG-202 lncRNA tongue (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 9679.00 5.01 18.87 52.34 RPL17-211 retained intron tongue (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 23754.00 12.30 46.30 44.27 RPL17-211 retained intron tongue (Tissue)