ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 270249.00 84.98 566.77 100.0 SNHG29-232 lncRNA metanephros (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 325.00 0.10 0.68 100.0 SNHG29-232 lncRNA metanephros (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 937.00 0.29 1.97 100.0 SNHG29-232 lncRNA metanephros (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 985.00 0.31 2.07 100.0 SNHG29-232 lncRNA metanephros (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 9159.00 2.88 19.21 100.0 SNHG29-232 lncRNA metanephros (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 31486.00 9.90 66.03 100.0 SNHG29-232 lncRNA metanephros (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 602.00 0.58 1.26 100.0 SNHG14-234 lncRNA metanephros (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 42997.00 41.33 90.17 95.85 SNHG14-234 lncRNA metanephros (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 642.00 0.62 1.35 100.0 SNHG14-234 lncRNA metanephros (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 5460.00 5.25 11.45 100.0 SNHG14-234 lncRNA metanephros (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 19249.00 18.50 40.37 100.0 SNHG14-234 lncRNA metanephros (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 12087.00 11.62 25.35 94.79 SNHG14-234 lncRNA metanephros (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 2804.00 9.74 5.88 70.38 ENST00000655317 lncRNA metanephros (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 5215.00 18.12 10.94 100.0 ENST00000655317 lncRNA metanephros (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 2207.00 7.67 4.63 38.54 ENST00000655317 lncRNA metanephros (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 929.00 3.23 1.95 100.0 ENST00000655317 lncRNA metanephros (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 6453.00 2.88 13.53 90.54 LINC01962-202 lncRNA metanephros (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 214210.00 95.76 449.25 100.0 LINC01962-202 lncRNA metanephros (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 302.00 0.14 0.63 100.0 LINC01962-202 lncRNA metanephros (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 14820.00 41.79 31.08 91.12 SNHG14-241 lncRNA metanephros (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 163843.00 97.84 343.62 100.0 MEG8-228 lncRNA metanephros (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 2998.00 20.89 6.29 100.0 SNHG14-254 lncRNA metanephros (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 4921.00 24.91 10.32 100.0 SNHG14-261 lncRNA metanephros (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 7074.00 35.81 14.84 90.59 SNHG14-261 lncRNA metanephros (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 24.00 0.50 0.05 100.0 LIMD1-AS1-204 lncRNA metanephros (Tissue)