ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 420.00 8.70 0.88 92.51 LIMD1-AS1-204 lncRNA metanephros (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 66290.00 79.80 139.02 93.69 MIR99AHG-262 lncRNA metanephros (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 2710.00 3.26 5.68 100.0 MIR99AHG-262 lncRNA metanephros (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 15.00 8.11 0.03 100.0 SNHG14-266 lncRNA metanephros (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 547.00 62.80 1.15 100.0 SNHG14-270 lncRNA metanephros (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 623.00 0.71 1.31 100.0 SNHG14-275 lncRNA metanephros (Tissue)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 6.00 0.47 0.01 100.0 MIR9-2HG-225 lncRNA metanephros (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 1029.00 81.41 2.16 89.4 MIR9-2HG-225 lncRNA metanephros (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 2437.00 24.77 5.11 100.0 MEG8-233 lncRNA metanephros (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 4201.00 42.70 8.81 100.0 MEG8-233 lncRNA metanephros (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 2078.00 27.56 4.36 100.0 SNHG14-278 lncRNA metanephros (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 158.00 2.10 0.33 76.7 SNHG14-278 lncRNA metanephros (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 6463.00 54.37 13.55 100.0 MEG8-234 lncRNA metanephros (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 563.00 4.74 1.18 100.0 MEG8-234 lncRNA metanephros (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 1968.00 88.09 4.13 100.0 SNHG17-252 lncRNA metanephros (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 5740.00 26.05 12.04 74.44 SNHG14-288 lncRNA metanephros (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 14255.00 64.70 29.90 92.65 SNHG14-288 lncRNA metanephros (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 9.00 5.77 0.02 100.0 SNHG14-295 lncRNA metanephros (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 3372.00 70.74 7.07 100.0 MEG8-240 lncRNA metanephros (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 56.00 0.76 0.12 100.0 SNHG14-303 lncRNA metanephros (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 21.00 3.11 0.04 100.0 SNHG14-306 lncRNA metanephros (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 2.00 0.30 0.00 100.0 SNHG14-306 lncRNA metanephros (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 467.00 69.08 0.98 96.89 SNHG14-306 lncRNA metanephros (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 8.00 1.18 0.02 100.0 SNHG14-306 lncRNA metanephros (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 1.00 0.06 0.00 100.0 ENST00000666735 lncRNA metanephros (Tissue)