ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 204.00 0.02 0.43 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1292.00 22.99 2.71 100.0 FTX-219 lncRNA metanephros (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 1738.00 30.92 3.64 83.88 FTX-219 lncRNA metanephros (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 117.00 6.63 0.25 43.98 CTC1-214 protein coding metanephros (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 7.00 0.40 0.01 16.67 CTC1-214 protein coding metanephros (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 228.00 12.92 0.48 73.55 CTC1-214 protein coding metanephros (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 149.00 8.44 0.31 56.02 CTC1-214 protein coding metanephros (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 244.00 13.82 0.51 85.02 CTC1-214 protein coding metanephros (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 17.00 0.96 0.04 100.0 CTC1-214 protein coding metanephros (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 62.00 3.51 0.13 100.0 CTC1-214 protein coding metanephros (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 108.00 6.12 0.23 100.0 CTC1-214 protein coding metanephros (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 4054.00 1.87 8.50 78.72 ENST00000651540 lncRNA metanephros (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 665.00 0.31 1.39 98.37 ENST00000651540 lncRNA metanephros (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 4248.00 1.96 8.91 100.0 ENST00000651540 lncRNA metanephros (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 8835.00 4.08 18.53 62.06 ENST00000651540 lncRNA metanephros (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 504.00 0.23 1.06 100.0 ENST00000651540 lncRNA metanephros (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 621.00 0.29 1.30 100.0 ENST00000651540 lncRNA metanephros (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 527.00 0.24 1.11 100.0 ENST00000651540 lncRNA metanephros (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 6470.00 2.99 13.57 100.0 ENST00000651540 lncRNA metanephros (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 2270.00 1.05 4.76 100.0 ENST00000651540 lncRNA metanephros (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 29823.00 13.76 62.55 43.03 ENST00000651540 lncRNA metanephros (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 35638.00 16.45 74.74 100.0 ENST00000651540 lncRNA metanephros (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 74571.00 34.42 156.39 70.53 ENST00000651540 lncRNA metanephros (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 12667.00 2.19 26.57 100.0 MIRLET7A1HG-203 lncRNA metanephros (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 25802.00 94.59 54.11 100.0 MEG8-225 lncRNA metanephros (Tissue)