ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 68717.00 78.22 144.11 100.0 DNM3OS-205 lncRNA metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 123.00 0.01 0.26 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 2079.00 0.21 4.36 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 2567.00 0.26 5.38 81.13 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 6979.00 0.71 14.64 92.28 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 20.00 0.00 0.04 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 1862.00 0.19 3.91 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 972.00 0.10 2.04 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 741883.00 74.97 1555.89 99.82 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1042.00 0.11 2.19 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 8694.00 0.88 18.23 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 2446.00 0.25 5.13 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 883.00 0.09 1.85 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 1253.00 0.13 2.63 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 90.00 0.01 0.19 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 479.00 0.05 1.00 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 700.00 0.07 1.47 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 11123.00 1.12 23.33 83.08 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 8057.00 0.81 16.90 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 20033.00 2.02 42.01 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 34234.00 3.46 71.80 94.5 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 84381.00 8.53 176.97 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 562.00 0.06 1.18 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 5394.00 0.55 11.31 100.0 GAS5-230 retained intron metanephros (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 21747.00 2.20 45.61 100.0 GAS5-230 retained intron metanephros (Tissue)