ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 2643.00 2.73 3.49 100.0 POLG-DT-202 lncRNA thyroid gland (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 25184.00 66.06 33.22 100.0 ENST00000570843 lncRNA thyroid gland (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 15750.00 72.67 20.78 100.0 MIR497HG-207 lncRNA thyroid gland (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 1396430.00 99.54 1841.99 99.83 MIR22HG-212 lncRNA thyroid gland (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 1007.00 0.48 1.33 55.67 SNORD53B-201 snoRNA thyroid gland (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 196204.00 94.21 258.81 96.71 SNORD53B-201 snoRNA thyroid gland (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 802.00 0.39 1.06 44.33 SNORD53B-201 snoRNA thyroid gland (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 3974.00 91.25 5.24 100.0 ENST00000578036 lncRNA thyroid gland (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 7129.00 87.15 9.40 100.0 RPL23A-207 protein coding thyroid gland (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 1613.00 80.81 2.13 100.0 MIR744-201 miRNA thyroid gland (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 19871.00 68.80 26.21 100.0 MIR378C-201 miRNA thyroid gland (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 303.00 0.81 0.40 100.0 MIR142HG-201 lncRNA thyroid gland (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 4171.00 11.14 5.50 38.13 MIR142HG-201 lncRNA thyroid gland (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 25527.00 68.17 33.67 83.77 MIR142HG-201 lncRNA thyroid gland (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 287.00 1.74 0.38 100.0 SNORD3C-201 snoRNA thyroid gland (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 140.12 0.07 0.18 51.51 RPL23A-208 retained intron thyroid gland (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 156910.00 76.27 206.98 89.39 RPL23A-208 retained intron thyroid gland (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 44745.00 21.75 59.02 92.79 RPL23A-208 retained intron thyroid gland (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 231.12 0.11 0.30 63.15 RPL23A-208 retained intron thyroid gland (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 17355.00 1.23 22.89 100.0 MIR133A1HG-202 lncRNA thyroid gland (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 12016.00 3.70 15.85 45.57 RPL17-211 retained intron thyroid gland (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 42388.00 13.06 55.91 44.78 RPL17-211 retained intron thyroid gland (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 1484.00 0.46 1.96 100.0 RPL17-211 retained intron thyroid gland (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 182006.00 56.07 240.08 94.96 RPL17-211 retained intron thyroid gland (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 72607.00 22.37 95.77 97.29 RPL17-211 retained intron thyroid gland (Tissue)