ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 70.00 0.35 0.09 100.0 ENST00000554988 lncRNA thyroid gland (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 3024.00 15.18 3.99 100.0 ENST00000554988 lncRNA thyroid gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 962.00 0.68 1.27 100.0 SNHG14-220 retained intron thyroid gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 1885.00 1.34 2.49 100.0 SNHG14-220 retained intron thyroid gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 73354.00 51.97 96.76 100.0 SNHG14-220 retained intron thyroid gland (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 57144.00 40.49 75.38 100.0 SNHG14-220 retained intron thyroid gland (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 15023.00 99.51 19.82 100.0 TEKT4P2-201 transcribed unprocessed pseudogene thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 102.00 0.03 0.13 100.0 RPL4-202 retained intron thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 2454.00 0.61 3.24 100.0 RPL4-202 retained intron thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 738.00 0.18 0.97 100.0 RPL4-202 retained intron thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 1675.00 0.42 2.21 100.0 RPL4-202 retained intron thyroid gland (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 367418.00 91.94 484.65 98.52 RPL4-202 retained intron thyroid gland (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 174.00 0.45 0.23 100.0 ENST00000563103 lncRNA thyroid gland (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 8671.00 63.93 11.44 100.0 RPL4-207 retained intron thyroid gland (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 136.00 1.00 0.18 100.0 RPL4-207 retained intron thyroid gland (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 156921.00 89.44 206.99 97.47 ENST00000565336 lncRNA thyroid gland (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 6942.00 3.96 9.16 67.05 ENST00000565336 lncRNA thyroid gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 612952.00 75.45 808.53 79.07 RBMX-210 retained intron thyroid gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 4383.00 0.54 5.78 100.0 RBMX-210 retained intron thyroid gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 1803.00 0.22 2.38 100.0 RBMX-210 retained intron thyroid gland (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 5309.00 0.65 7.00 100.0 RBMX-210 retained intron thyroid gland (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 7794.00 55.89 10.28 100.0 RPL4-214 retained intron thyroid gland (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 1925.00 13.80 2.54 100.0 RPL4-214 retained intron thyroid gland (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 31555.16 32.54 41.62 49.21 POLG-DT-202 lncRNA thyroid gland (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 34169.27 35.24 45.07 50.82 POLG-DT-202 lncRNA thyroid gland (Tissue)