ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 14.00 9.59 0.02 100.0 HCN2-201 protein coding thyroid gland (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 504.00 79.12 0.66 100.0 SLC49A4-201 protein coding thyroid gland (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 190.00 5.33 0.25 100.0 ATP5MC3-201 protein coding thyroid gland (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 1124.00 95.66 1.48 100.0 CDC25A-201 protein coding thyroid gland (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 29.00 26.13 0.04 100.0 RUNX3-201 protein coding thyroid gland (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 51.00 37.23 0.07 100.0 BLOC1S4-201 protein coding thyroid gland (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 641.00 11.38 0.85 100.0 ATAD5-201 protein coding thyroid gland (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 4193.00 52.91 5.53 100.0 SLITRK5-201 protein coding thyroid gland (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 28.00 37.84 0.04 100.0 HASPIN-201 protein coding thyroid gland (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 2012.00 55.02 2.65 100.0 PRR14L-201 protein coding thyroid gland (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 11572.00 97.74 15.26 100.0 ATG101-201 protein coding thyroid gland (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 5918.00 80.90 7.81 100.0 PRICKLE1-201 protein coding thyroid gland (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 1336904.00 96.41 1763.47 98.7 MIR133A2-201 miRNA thyroid gland (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 6.00 14.29 0.01 100.0 PBLD-204 protein coding thyroid gland (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 971668.00 88.77 1281.70 98.42 MIRLET7BHG-201 lncRNA thyroid gland (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 64038.00 5.85 84.47 87.97 MIRLET7BHG-201 lncRNA thyroid gland (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 70443.00 96.51 92.92 98.2 MIR375-201 miRNA thyroid gland (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 1084.00 1.49 1.43 35.05 MIR375-201 miRNA thyroid gland (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 21889.00 22.65 28.87 100.0 MIR30E-201 miRNA thyroid gland (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 66820.00 69.13 88.14 100.0 MIR30E-201 miRNA thyroid gland (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 2585.00 53.64 3.41 100.0 MIR29A-201 miRNA thyroid gland (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 2037.00 81.94 2.69 100.0 MIR345-201 miRNA thyroid gland (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 185203.00 97.70 244.30 100.0 MIR16-2-201 miRNA thyroid gland (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 485.00 2.55 0.64 100.0 MIR340-201 miRNA thyroid gland (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 17170.00 90.17 22.65 100.0 MIR340-201 miRNA thyroid gland (Tissue)