ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 27116.00 61.05 35.77 100.0 GNL3-211 retained intron thyroid gland (Tissue)
ENST00000497519.1 ENST00000497519.1_675_769_+ 675–769 5.00 0.02 0.01 100.0 RPL5-205 retained intron thyroid gland (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 15692.00 69.81 20.70 100.0 RPL5-205 retained intron thyroid gland (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 1726.00 7.68 2.28 100.0 RPL5-205 retained intron thyroid gland (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 78.00 1.29 0.10 100.0 ZBED9-AS1-201 lncRNA thyroid gland (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 45168.00 90.35 59.58 100.0 RPS3A-206 retained intron thyroid gland (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 100312.00 93.77 132.32 100.0 COX7C-203 protein coding thyroid gland (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 2724.00 0.42 3.59 100.0 RACK1-229 protein coding thyroid gland (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 99002.79 15.22 130.59 24.48 RACK1-229 protein coding thyroid gland (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 495775.01 76.21 653.96 83.79 RACK1-229 protein coding thyroid gland (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 21598.00 3.32 28.49 90.03 RACK1-229 protein coding thyroid gland (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 504343.00 64.00 665.26 89.97 RACK1-230 retained intron thyroid gland (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 267949.00 34.00 353.44 63.69 RACK1-230 retained intron thyroid gland (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 6.00 3.03 0.01 100.0 RNA5SP486-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 4172.00 84.64 5.50 100.0 SCARNA5-201 scaRNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 329.00 0.19 0.43 100.0 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 88071.00 50.11 116.17 97.22 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 4724.00 2.69 6.23 89.37 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 109.00 0.06 0.14 100.0 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1285.00 0.73 1.70 45.28 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 11087.00 6.31 14.62 67.7 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 1095.00 0.62 1.44 100.0 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 5665.00 3.22 7.47 69.2 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 558.00 0.32 0.74 100.0 RNY4-201 misc RNA thyroid gland (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 789.00 0.45 1.04 67.67 RNY4-201 misc RNA thyroid gland (Tissue)