ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 52040.00 34.92 107.91 100.0 SNORD115-15-201 snoRNA diencephalon (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 277.00 7.56 0.57 100.0 SNORD113-3-201 snoRNA diencephalon (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 9163.00 72.31 19.00 100.0 SNORD52-201 snoRNA diencephalon (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 3821.00 40.04 7.92 66.14 SNORD117-201 snoRNA diencephalon (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 1956.00 20.50 4.06 42.68 SNORD117-201 snoRNA diencephalon (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 78860.00 87.15 163.52 98.1 SNORD114-3-201 snoRNA diencephalon (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 3223.00 3.56 6.68 100.0 SNORD114-3-201 snoRNA diencephalon (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 3237.00 3.58 6.71 100.0 SNORD114-3-201 snoRNA diencephalon (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 12.00 0.59 0.02 100.0 RNA5SP298-201 rRNA pseudogene diencephalon (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 67114.00 47.95 139.16 100.0 SNORD115-38-201 snoRNA diencephalon (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 102093.00 50.33 211.69 100.0 SNORD115-10-201 snoRNA diencephalon (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 19101.00 80.58 39.61 100.0 SNORD113-9-201 snoRNA diencephalon (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 14549.00 55.93 30.17 100.0 SNORD115-20-201 snoRNA diencephalon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 188.00 0.94 0.39 100.0 SNORD38A-201 snoRNA diencephalon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 18268.00 90.95 37.88 100.0 SNORD38A-201 snoRNA diencephalon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 741.00 3.69 1.54 100.0 SNORD38A-201 snoRNA diencephalon (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 148379.00 93.93 307.67 98.69 SNORD114-20-201 snoRNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 843.00 7.25 1.75 66.8 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 150.00 1.29 0.31 100.0 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 580.00 4.99 1.20 100.0 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 588.00 5.06 1.22 100.0 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 228.00 1.96 0.47 33.28 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 23.00 0.20 0.05 100.0 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 1042.00 8.97 2.16 100.0 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 1431.00 12.31 2.97 77.35 7SK.1-201 misc RNA diencephalon (Tissue)