ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 26335.00 47.47 54.61 100.0 SNORD115-32-201 snoRNA diencephalon (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 26897.00 39.03 55.77 100.0 SNORD115-30-201 snoRNA diencephalon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 586.00 0.52 1.22 100.0 RNY1-201 misc RNA diencephalon (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 11883.00 10.57 24.64 100.0 RNY1-201 misc RNA diencephalon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1443.00 1.28 2.99 100.0 RNY1-201 misc RNA diencephalon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 43224.01 38.43 89.63 73.25 RNY1-201 misc RNA diencephalon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 10921.73 9.71 22.65 28.6 RNY1-201 misc RNA diencephalon (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 46729.00 32.92 96.89 100.0 SNORD115-42-201 snoRNA diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 991.00 4.02 2.05 100.0 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 2338.80 9.50 4.85 42.7 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 258.33 1.05 0.54 14.45 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 62.00 0.25 0.13 100.0 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 1333.63 5.42 2.77 75.9 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 209.00 0.85 0.43 100.0 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 74.00 0.30 0.15 100.0 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 8.00 0.03 0.02 100.0 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 549.00 2.23 1.14 100.0 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 20612.00 45.61 42.74 100.0 SNORD114-9-201 snoRNA diencephalon (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 19007.00 42.06 39.41 100.0 SNORD114-9-201 snoRNA diencephalon (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 906.00 1.53 1.88 100.0 Y_RNA.234-201 misc RNA diencephalon (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 21.00 0.11 0.04 100.0 RNA5S9-201 rRNA diencephalon (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 18292.00 56.00 37.93 100.0 SNORD115-23-201 snoRNA diencephalon (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 47.00 1.85 0.10 100.0 RNA5SP141-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 1231.00 56.99 2.55 100.0 SNORD114-15-201 snoRNA diencephalon (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 1854.00 48.13 3.84 100.0 ENST00000364722 snoRNA diencephalon (Tissue)