ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 411.00 7.85 0.85 100.0 SNORD104-201 snoRNA diencephalon (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 517.00 9.87 1.07 100.0 SNORD104-201 snoRNA diencephalon (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 172297.00 62.20 357.26 97.53 SNORD115-9-201 snoRNA diencephalon (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 6810.00 45.09 14.12 83.11 RNA5SP358-201 rRNA pseudogene diencephalon (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 53.00 1.08 0.11 81.54 RNA5SP145-201 rRNA pseudogene diencephalon (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 8399.00 32.42 17.42 100.0 Y_RNA.105-201 misc RNA diencephalon (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 11939.00 34.36 24.76 100.0 RNY4P9-201 misc RNA diencephalon (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 2486.00 7.78 5.15 100.0 RNU5B-1-201 snRNA diencephalon (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1021.00 3.19 2.12 100.0 RNU5B-1-201 snRNA diencephalon (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 1613.00 5.05 3.34 100.0 RNU5B-1-201 snRNA diencephalon (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 2766.00 8.65 5.74 72.85 RNU5B-1-201 snRNA diencephalon (Tissue)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 155.00 0.48 0.32 100.0 RNU5B-1-201 snRNA diencephalon (Tissue)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 6465.00 20.22 13.41 100.0 RNU5B-1-201 snRNA diencephalon (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 532280.00 93.74 1103.69 98.7 SNORD115-18-201 snoRNA diencephalon (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 316349.00 89.43 655.95 98.2 RNY4P27-201 misc RNA diencephalon (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 3806.00 1.08 7.89 39.67 RNY4P27-201 misc RNA diencephalon (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 10531.00 35.69 21.84 100.0 Y_RNA.136-201 misc RNA diencephalon (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 101419.00 51.90 210.29 100.0 SNORD115-41-201 snoRNA diencephalon (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 94045.00 47.74 195.00 100.0 SNORD115-5-201 snoRNA diencephalon (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 28688.00 41.23 59.48 100.0 SNORD115-33-201 snoRNA diencephalon (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 29186.00 91.71 60.52 99.75 SNORD114-25-201 snoRNA diencephalon (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 61313.00 94.70 127.13 100.0 SNORD113-7-201 snoRNA diencephalon (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 13195.00 16.47 27.36 100.0 SNORD115-8-201 snoRNA diencephalon (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 4420.00 57.70 9.16 100.0 Y_RNA.181-201 misc RNA diencephalon (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 54101.00 36.81 112.18 100.0 SNORD115-16-201 snoRNA diencephalon (Tissue)