ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 2983.00 83.21 6.19 93.39 SNHG18-220 lncRNA diencephalon (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 162.00 22.75 0.34 100.0 ENST00000817026 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 2136.00 2.98 4.43 100.0 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 1698.04 2.37 3.52 49.84 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 1523.24 2.12 3.16 47.66 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 431.00 0.60 0.89 100.0 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 12902.00 17.98 26.75 99.19 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 2959.52 4.12 6.14 47.81 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 2472.23 3.44 5.13 41.78 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 4577.00 6.38 9.49 79.82 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 6279.07 8.75 13.02 46.81 ENST00000823279 lncRNA diencephalon (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 6584.65 9.18 13.65 43.36 ENST00000823801 lncRNA diencephalon (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 496.00 39.58 1.03 45.97 ENST00000827714 lncRNA diencephalon (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 583.00 46.53 1.21 54.03 ENST00000827714 lncRNA diencephalon (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 823.00 1.84 1.71 100.0 GAS5-377 lncRNA diencephalon (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 40589.00 90.61 84.16 100.0 GAS5-377 lncRNA diencephalon (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 1107.00 2.47 2.30 100.0 GAS5-377 lncRNA diencephalon (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 341.00 0.76 0.71 100.0 GAS5-377 lncRNA diencephalon (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 11.00 91.67 0.02 100.0 MIR205HG-245 lncRNA diencephalon (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 3939.00 59.95 8.17 100.0 TAF12-DT-204 lncRNA diencephalon (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 327015.00 94.41 678.07 99.71 ZFAS1-238 lncRNA diencephalon (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 1403.00 0.41 2.91 100.0 ZFAS1-238 lncRNA diencephalon (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 4787.00 1.38 9.93 100.0 ZFAS1-238 lncRNA diencephalon (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1361.00 0.39 2.82 100.0 ZFAS1-238 lncRNA diencephalon (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 72142.00 86.52 149.59 100.0 ZFAS1-242 lncRNA diencephalon (Tissue)