ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 30.00 0.01 0.06 100.0 SNHG12-223 lncRNA diencephalon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 124292.00 55.41 257.72 95.96 SNHG12-223 lncRNA diencephalon (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 98088.00 43.72 203.39 99.15 SNHG12-223 lncRNA diencephalon (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 1068.00 0.07 2.21 100.0 SNHG25-206 lncRNA diencephalon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 906913.00 63.66 1880.49 64.45 SNHG25-206 lncRNA diencephalon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 1443.00 0.10 2.99 100.0 SNHG25-206 lncRNA diencephalon (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 170.42 0.01 0.35 58.16 SNHG25-206 lncRNA diencephalon (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 331.15 0.02 0.69 38.64 SNHG25-206 lncRNA diencephalon (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 201.41 0.01 0.42 18.46 SNHG25-206 lncRNA diencephalon (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 1538.00 0.11 3.19 74.84 SNHG25-206 lncRNA diencephalon (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 157.00 0.01 0.33 100.0 SNHG25-206 lncRNA diencephalon (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 2435.00 73.77 5.05 100.0 ENST00000778783 lncRNA diencephalon (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 778.00 84.57 1.61 88.91 MIR155HG-205 lncRNA diencephalon (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 330.00 10.48 0.68 100.0 ENST00000785178 lncRNA diencephalon (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 251.00 11.64 0.52 82.57 ENST00000786284 lncRNA diencephalon (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 666.00 30.88 1.38 100.0 ENST00000786284 lncRNA diencephalon (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 53.00 2.46 0.11 37.86 ENST00000786284 lncRNA diencephalon (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 6879.00 60.59 14.26 72.43 ENST00000788343 lncRNA diencephalon (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 3214.64 35.44 6.67 52.01 ENST00000797550 lncRNA diencephalon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 1386.58 15.29 2.88 22.43 ENST00000797550 lncRNA diencephalon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 84.00 0.93 0.17 35.74 ENST00000797550 lncRNA diencephalon (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 625097.00 78.40 1296.15 90.53 MIR181A1HG-212 lncRNA diencephalon (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 13603.00 1.71 28.21 100.0 MIR181A1HG-212 lncRNA diencephalon (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 84.00 8.65 0.17 100.0 C19orf48P-218 lncRNA diencephalon (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 450.00 46.34 0.93 100.0 C19orf48P-218 lncRNA diencephalon (Tissue)