ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 1258.00 0.07 1.89 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 11473.00 0.66 17.27 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 48335.00 2.77 72.77 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 865.00 0.05 1.30 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1631.00 24.38 2.46 100.0 FTX-219 lncRNA lung (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 2061.00 30.81 3.10 85.95 FTX-219 lncRNA lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 120.00 4.09 0.18 54.55 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 16.00 0.55 0.02 8.84 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 468.00 15.95 0.70 58.43 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 100.00 3.41 0.15 45.45 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 579.00 19.73 0.87 74.9 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 72.00 2.45 0.11 100.0 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 105.00 3.58 0.16 100.0 CTC1-214 protein coding lung (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 473.00 16.12 0.71 100.0 CTC1-214 protein coding lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 3260.00 2.11 4.91 74.29 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 4692.00 3.04 7.06 98.97 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 8948.00 5.80 13.47 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 5895.00 3.82 8.87 56.69 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 1868.00 1.21 2.81 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 1967.00 1.27 2.96 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 1504.00 0.97 2.26 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 1860.00 1.21 2.80 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 3165.00 2.05 4.76 100.0 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 23850.00 15.45 35.91 59.52 ENST00000651540 lncRNA lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 8259.00 5.35 12.43 100.0 ENST00000651540 lncRNA lung (Tissue)