ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 1024.04 26.34 1.54 75.08 5S_rRNA.20-201 rRNA pseudogene lung (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 951.00 11.14 1.43 100.0 HSPA9-211 retained intron lung (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1631.00 19.11 2.46 40.91 HSPA9-211 retained intron lung (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 140941.00 83.78 212.18 100.0 DNM3OS-205 lncRNA lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 5426.00 0.31 8.17 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 596.00 0.03 0.90 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 5601.00 0.32 8.43 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 2666.00 0.15 4.01 71.21 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 30542.00 1.75 45.98 96.58 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 78.00 0.00 0.12 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 1227.00 0.07 1.85 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 2283.00 0.13 3.44 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 1116036.00 63.95 1680.16 99.73 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 2363.00 0.14 3.56 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 7814.00 0.45 11.76 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 4222.00 0.24 6.36 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 4173.00 0.24 6.28 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 1366.00 0.08 2.06 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 638.00 0.04 0.96 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 1270.00 0.07 1.91 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 43128.00 2.47 64.93 85.35 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 22142.00 1.27 33.33 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 79251.00 4.54 119.31 100.0 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 83594.00 4.79 125.85 96.42 GAS5-230 retained intron lung (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 199501.00 11.43 300.34 100.0 GAS5-230 retained intron lung (Tissue)