ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 2507.00 11.37 3.77 100.0 ENST00000554988 lncRNA lung (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 3246.00 2.10 4.89 100.0 SNHG14-220 retained intron lung (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 62873.00 40.77 94.65 100.0 SNHG14-220 retained intron lung (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 80009.00 51.88 120.45 100.0 SNHG14-220 retained intron lung (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 1089.00 0.71 1.64 100.0 SNHG14-220 retained intron lung (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 954.00 99.48 1.44 100.0 TEKT4P2-201 transcribed unprocessed pseudogene lung (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 639.00 0.14 0.96 100.0 RPL4-202 retained intron lung (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 408.00 0.09 0.61 100.0 RPL4-202 retained intron lung (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 442834.00 96.39 666.67 99.43 RPL4-202 retained intron lung (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 288.00 0.06 0.43 100.0 RPL4-202 retained intron lung (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 1468.00 0.32 2.21 100.0 RPL4-202 retained intron lung (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 1.00 0.01 0.00 100.0 ENST00000563103 lncRNA lung (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 360.00 3.01 0.54 100.0 RPL4-207 retained intron lung (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 8113.00 67.83 12.21 100.0 RPL4-207 retained intron lung (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 3447.00 59.01 5.19 93.19 ENST00000565336 lncRNA lung (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 1074.00 18.39 1.62 88.76 ENST00000565336 lncRNA lung (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 384260.00 83.51 578.49 88.5 RBMX-210 retained intron lung (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 3171.00 0.69 4.77 100.0 RBMX-210 retained intron lung (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 922.00 0.20 1.39 100.0 RBMX-210 retained intron lung (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 9100.00 1.98 13.70 100.0 RBMX-210 retained intron lung (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 11912.00 71.64 17.93 100.0 RPL4-214 retained intron lung (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 721.00 4.34 1.09 100.0 RPL4-214 retained intron lung (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 172.00 1.15 0.26 100.0 POLG-DT-202 lncRNA lung (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 5133.15 34.41 7.73 53.93 POLG-DT-202 lncRNA lung (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 5079.67 34.05 7.65 49.17 POLG-DT-202 lncRNA lung (Tissue)