ENCFF001RMQ

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 4052.00 66.91 6.10 100.0 ENST00000570843 lncRNA lung (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 14802.00 71.88 22.28 100.0 MIR497HG-207 lncRNA lung (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 280289.00 98.82 421.97 99.41 MIR22HG-212 lncRNA lung (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 988.00 0.78 1.49 32.25 SNORD53B-201 snoRNA lung (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 2076.00 1.63 3.13 67.75 SNORD53B-201 snoRNA lung (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 116577.00 91.70 175.50 95.38 SNORD53B-201 snoRNA lung (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 516.00 89.27 0.78 100.0 ENST00000578036 lncRNA lung (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 8905.00 91.49 13.41 100.0 RPL23A-207 protein coding lung (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 2573.00 88.88 3.87 100.0 MIR744-201 miRNA lung (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 77.00 63.11 0.12 100.0 MIR378C-201 miRNA lung (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 498.00 1.99 0.75 5.22 MIR142HG-201 lncRNA lung (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 49.00 0.20 0.07 100.0 MIR142HG-201 lncRNA lung (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 16900.00 67.68 25.44 74.0 MIR142HG-201 lncRNA lung (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 1187.00 4.76 1.79 100.0 SNORD3C-201 snoRNA lung (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 1667.72 0.27 2.51 59.2 RPL23A-208 retained intron lung (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 1177.13 0.19 1.77 53.1 RPL23A-208 retained intron lung (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 468460.00 76.20 705.25 86.57 RPL23A-208 retained intron lung (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 137228.00 22.32 206.59 91.5 RPL23A-208 retained intron lung (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 65.00 1.07 0.10 100.0 MIR133A1HG-202 lncRNA lung (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 790.00 0.25 1.19 100.0 RPL17-211 retained intron lung (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 7827.00 2.49 11.78 38.02 RPL17-211 retained intron lung (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 24386.00 7.75 36.71 40.48 RPL17-211 retained intron lung (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 191494.00 60.84 288.29 96.51 RPL17-211 retained intron lung (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 81219.00 25.80 122.27 97.86 RPL17-211 retained intron lung (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 24208.00 50.56 36.44 75.27 ENST00000582320 lncRNA lung (Tissue)