ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 589.00 29.39 0.94 100.0 ZBED9-AS1-201 lncRNA frontal cortex (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 21974.00 93.03 35.07 100.0 RPS3A-206 retained intron frontal cortex (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 23755.00 94.79 37.91 100.0 COX7C-203 protein coding frontal cortex (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 147296.49 70.47 235.06 77.43 RACK1-229 protein coding frontal cortex (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 5967.00 2.85 9.52 86.86 RACK1-229 protein coding frontal cortex (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1510.00 0.72 2.41 100.0 RACK1-229 protein coding frontal cortex (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 39221.60 18.76 62.59 27.51 RACK1-229 protein coding frontal cortex (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 130197.00 82.62 207.77 97.89 RACK1-230 retained intron frontal cortex (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 25397.00 16.12 40.53 75.15 RACK1-230 retained intron frontal cortex (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 23.00 19.49 0.04 100.0 RNA5SP486-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1201.00 79.59 1.92 100.0 SCARNA5-201 scaRNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 1254.00 0.32 2.00 100.0 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 10773.00 2.73 17.19 100.0 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 12630.00 3.20 20.16 100.0 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 2239.00 0.57 3.57 100.0 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 4271.00 1.08 6.82 41.95 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 297799.00 75.38 475.24 98.05 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 7453.00 1.89 11.89 85.3 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 29.00 0.01 0.05 100.0 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 2238.00 0.57 3.57 76.64 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 28205.00 7.14 45.01 91.61 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 211.00 0.05 0.34 100.0 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 196.00 0.05 0.31 21.61 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1066.00 82.89 1.70 87.02 MIR3142HG-201 lncRNA frontal cortex (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 8470.00 87.91 13.52 100.0 SNHG6-204 retained intron frontal cortex (Tissue)