ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000497519.1 ENST00000497519.1_675_769_+ 675–769 1.00 0.02 0.00 100.0 RPL5-205 retained intron frontal cortex (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 4405.00 72.28 7.26 100.0 RPL5-205 retained intron frontal cortex (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 660.00 10.83 1.09 100.0 RPL5-205 retained intron frontal cortex (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 528.00 22.16 0.87 100.0 ZBED9-AS1-201 lncRNA frontal cortex (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 20126.00 94.32 33.17 100.0 RPS3A-206 retained intron frontal cortex (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 52334.00 95.89 86.25 100.0 COX7C-203 protein coding frontal cortex (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 5070.00 2.97 8.36 85.89 RACK1-229 protein coding frontal cortex (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1007.00 0.59 1.66 100.0 RACK1-229 protein coding frontal cortex (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 118315.38 69.39 194.98 76.22 RACK1-229 protein coding frontal cortex (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 34105.38 20.00 56.21 28.19 RACK1-229 protein coding frontal cortex (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 38720.00 18.21 63.81 66.69 RACK1-230 retained intron frontal cortex (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 171560.00 80.67 282.73 96.81 RACK1-230 retained intron frontal cortex (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 23.00 18.11 0.04 100.0 RNA5SP486-201 rRNA pseudogene frontal cortex (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1542.00 83.31 2.54 100.0 SCARNA5-201 scaRNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 6767.00 2.52 11.15 100.0 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 699.00 0.26 1.15 100.0 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 183395.00 68.23 302.23 97.9 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 15583.00 5.80 25.68 97.6 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 20.00 0.01 0.03 100.0 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 892.00 0.33 1.47 57.62 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 28174.00 10.48 46.43 91.23 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 861.00 0.32 1.42 100.0 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 3307.00 1.23 5.45 45.71 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 231.00 0.09 0.38 100.0 RNY4-201 misc RNA frontal cortex (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 248.00 0.09 0.41 50.72 RNY4-201 misc RNA frontal cortex (Tissue)