ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 25456.00 74.80 47.08 100.0 GNL3-211 retained intron cerebellum (Tissue)
ENST00000497519.1 ENST00000497519.1_675_769_+ 675–769 1.00 0.02 0.00 100.0 RPL5-205 retained intron cerebellum (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 4032.00 71.94 7.46 100.0 RPL5-205 retained intron cerebellum (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 585.00 10.44 1.08 100.0 RPL5-205 retained intron cerebellum (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 1029.00 31.75 1.90 100.0 ZBED9-AS1-201 lncRNA cerebellum (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 16994.00 90.37 31.43 100.0 RPS3A-206 retained intron cerebellum (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 63951.00 95.70 118.28 100.0 COX7C-203 protein coding cerebellum (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1151.00 0.48 2.13 100.0 RACK1-229 protein coding cerebellum (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 54466.38 22.86 100.74 31.13 RACK1-229 protein coding cerebellum (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 163405.41 68.57 302.23 74.56 RACK1-229 protein coding cerebellum (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 5979.00 2.51 11.06 84.47 RACK1-229 protein coding cerebellum (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 168716.00 58.77 312.06 90.45 RACK1-230 retained intron cerebellum (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 113935.00 39.69 210.73 69.96 RACK1-230 retained intron cerebellum (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 15.00 9.04 0.03 100.0 RNA5SP486-201 rRNA pseudogene cerebellum (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1850.00 85.29 3.42 100.0 SCARNA5-201 scaRNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 1003.00 0.23 1.86 100.0 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 251306.00 58.33 464.82 97.88 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 36497.00 8.47 67.50 91.46 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 50.00 0.01 0.09 100.0 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 2038.00 0.47 3.77 62.23 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 40628.00 9.43 75.15 72.92 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 1940.00 0.45 3.59 100.0 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 7626.00 1.77 14.11 58.36 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 2121.00 0.49 3.92 100.0 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 493.00 0.11 0.91 42.35 RNY4-201 misc RNA cerebellum (Tissue)