ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 40628.00 9.43 75.15 72.92 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 16065.00 3.73 29.71 100.0 RNY4-201 misc RNA cerebellum (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 2873.00 83.42 5.31 89.0 MIR3142HG-201 lncRNA cerebellum (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 12355.00 84.02 22.85 100.0 SNHG6-204 retained intron cerebellum (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 74673.00 39.58 138.12 100.0 MIR151A-201 miRNA cerebellum (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 92618.00 49.09 171.31 85.13 MIR151A-201 miRNA cerebellum (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1005.00 90.05 1.86 100.0 DENND3-221 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 29.00 0.01 0.05 100.0 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 76.00 0.03 0.14 56.3 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 2105.00 0.72 3.89 70.21 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 59.00 0.02 0.11 43.7 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 219.00 0.08 0.41 72.04 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 362.00 0.12 0.67 100.0 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 789.00 0.27 1.46 100.0 WDR74-204 protein coding cerebellum (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 387.00 0.13 0.72 100.0 WDR74-204 protein coding cerebellum (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 12824.00 84.98 23.72 100.0 HSPA8-211 retained intron cerebellum (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 2827.00 27.46 5.23 100.0 SCARNA9-201 lncRNA cerebellum (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 89063.00 95.62 164.73 100.0 TAF1D-215 retained intron cerebellum (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 349.00 0.37 0.65 100.0 TAF1D-215 retained intron cerebellum (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 4.00 4.04 0.01 100.0 HSPA8-215 retained intron cerebellum (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 26.00 26.26 0.05 100.0 HSPA8-215 retained intron cerebellum (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 524.00 21.64 0.97 100.0 RPS2-215 retained intron cerebellum (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 25808.00 82.88 47.73 84.1 ENST00000548801 lncRNA cerebellum (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 5826.00 34.76 10.78 100.0 ENST00000554988 lncRNA cerebellum (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 35.00 0.21 0.06 100.0 ENST00000554988 lncRNA cerebellum (Tissue)