ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000488946.1 ENST00000488946.1_1364_1441_+ 1364–1441 1900.00 0.72 3.51 53.93 RPL13A-212 retained intron cerebellum (Tissue)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 3657.00 1.39 6.76 100.0 RPL13A-212 retained intron cerebellum (Tissue)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 223618.00 84.97 413.60 98.45 RPL13A-212 retained intron cerebellum (Tissue)
ENST00000488946.1 ENST00000488946.1_1357_1443_+ 1357–1443 1.00 0.00 0.00 100.0 RPL13A-212 retained intron cerebellum (Tissue)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 10373.00 3.94 19.19 82.78 RPL13A-212 retained intron cerebellum (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 164.00 0.06 0.30 100.0 RPL13A-212 retained intron cerebellum (Tissue)
ENST00000488946.1 ENST00000488946.1_148_235_+ 148–235 5.00 0.00 0.01 100.0 RPL13A-212 retained intron cerebellum (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 19.00 0.01 0.04 100.0 RPL13A-212 retained intron cerebellum (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 729.00 0.28 1.35 100.0 RPL13A-212 retained intron cerebellum (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 612.00 3.03 1.13 100.0 RPL7A-207 protein coding CDS not defined cerebellum (Tissue)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 12618.00 62.57 23.34 82.07 RPL7A-207 protein coding CDS not defined cerebellum (Tissue)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 421.00 2.09 0.78 100.0 RPL7A-207 protein coding CDS not defined cerebellum (Tissue)
ENST00000490232.3 ENST00000490232.3_229_300_+ 229–300 1488.00 12.93 2.75 58.7 RN7SL2-201 misc RNA cerebellum (Tissue)
ENST00000490232.3 ENST00000490232.3_219_300_+ 219–300 342.00 2.97 0.63 100.0 RN7SL2-201 misc RNA cerebellum (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 4017.00 9.21 7.43 88.38 NOP56-217 protein coding CDS not defined cerebellum (Tissue)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 27937.00 64.07 51.67 78.38 NOP56-217 protein coding CDS not defined cerebellum (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 427.00 0.28 0.79 49.77 RABGGTB-213 protein coding CDS not defined cerebellum (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 1570.00 1.03 2.90 100.0 RABGGTB-213 protein coding CDS not defined cerebellum (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 990.00 0.65 1.83 100.0 RABGGTB-213 protein coding CDS not defined cerebellum (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 431.00 0.28 0.80 50.23 RABGGTB-213 protein coding CDS not defined cerebellum (Tissue)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 86154.00 56.34 159.35 92.62 RABGGTB-213 protein coding CDS not defined cerebellum (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 45994.00 30.08 85.07 95.82 RABGGTB-213 protein coding CDS not defined cerebellum (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 787.00 0.51 1.46 100.0 RABGGTB-213 protein coding CDS not defined cerebellum (Tissue)
ENST00000496055.5 ENST00000496055.5_465_553_+ 465–553 1.00 0.00 0.00 100.0 RABGGTB-213 protein coding CDS not defined cerebellum (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 25456.00 74.80 47.08 100.0 GNL3-211 retained intron cerebellum (Tissue)