ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 1369.00 0.26 3.56 25.55 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 2233.00 0.42 5.81 49.25 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 591.00 0.11 1.54 59.88 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 6623.00 1.25 17.22 62.75 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 577.00 0.11 1.50 100.0 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 4731.00 0.90 12.30 84.5 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 50211.00 9.50 130.55 54.67 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 297544.00 56.30 773.65 94.21 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 1627.00 0.31 4.23 100.0 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 4070.00 0.77 10.58 32.3 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 2.00 0.00 0.01 100.0 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 1464.00 0.28 3.81 100.0 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 121.00 0.02 0.31 100.0 EIF4A2-219 retained intron skin of body (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 83766.00 96.38 217.80 100.0 RPS8-207 protein coding CDS not defined skin of body (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 148.00 6.51 0.38 100.0 RPL7A-206 protein coding CDS not defined skin of body (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 496.00 21.80 1.29 100.0 RPL7A-206 protein coding CDS not defined skin of body (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 380.00 16.70 0.99 100.0 RPL7A-206 protein coding CDS not defined skin of body (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 677.00 0.12 1.76 100.0 RPL21-209 retained intron skin of body (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 73060.00 13.27 189.96 99.22 RPL21-209 retained intron skin of body (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 464276.00 84.33 1207.17 99.15 RPL21-209 retained intron skin of body (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 2061.00 0.37 5.36 100.0 RPL21-209 retained intron skin of body (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 1705.00 0.31 4.43 100.0 RPL21-209 retained intron skin of body (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 1689.00 23.04 4.39 100.0 GABRE-209 retained intron skin of body (Tissue)
ENST00000488946.1 ENST00000488946.1_148_235_+ 148–235 12.00 0.00 0.03 100.0 RPL13A-212 retained intron skin of body (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 14.00 0.01 0.04 100.0 RPL13A-212 retained intron skin of body (Tissue)