ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 10048.00 86.55 22.79 100.0 SNHG6-204 retained intron lung (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 60898.00 48.96 138.10 84.98 MIR151A-201 miRNA lung (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 49933.00 40.15 113.24 100.0 MIR151A-201 miRNA lung (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 3258.00 96.62 7.39 100.0 DENND3-221 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 498.00 0.05 1.13 100.0 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 1052.00 0.10 2.39 100.0 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 390.00 0.04 0.88 72.36 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 14.00 0.00 0.03 100.0 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 113.00 0.01 0.26 50.45 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 982.00 0.09 2.23 71.47 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 197.00 0.02 0.45 100.0 WDR74-204 protein coding lung (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 111.00 0.01 0.25 49.55 WDR74-204 protein coding lung (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 9427.00 81.75 21.38 100.0 HSPA8-211 retained intron lung (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 883.00 17.43 2.00 100.0 SCARNA9-201 lncRNA lung (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 55468.00 92.44 125.79 100.0 TAF1D-215 retained intron lung (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 280.00 0.47 0.63 100.0 TAF1D-215 retained intron lung (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 461.00 6.57 1.05 100.0 HSPA8-215 retained intron lung (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 4931.00 70.23 11.18 100.0 HSPA8-215 retained intron lung (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 46.00 0.66 0.10 100.0 HSPA8-215 retained intron lung (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 415.00 16.85 0.94 100.0 RPS2-215 retained intron lung (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 1411783.00 85.41 3201.61 86.2 ENST00000548801 lncRNA lung (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 853.00 9.22 1.93 100.0 ENST00000554988 lncRNA lung (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 2530.00 27.35 5.74 100.0 ENST00000554988 lncRNA lung (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 211.00 2.28 0.48 100.0 ENST00000554988 lncRNA lung (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 2139.00 1.88 4.85 100.0 SNHG14-220 retained intron lung (Tissue)