ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 51103.00 44.84 115.89 100.0 SNHG14-220 retained intron lung (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 2139.00 1.88 4.85 100.0 SNHG14-220 retained intron lung (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 55125.00 48.37 125.01 100.0 SNHG14-220 retained intron lung (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 553.00 98.93 1.25 100.0 TEKT4P2-201 transcribed unprocessed pseudogene lung (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 222728.00 93.16 505.10 99.18 RPL4-202 retained intron lung (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 608.00 0.25 1.38 100.0 RPL4-202 retained intron lung (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 218.00 0.09 0.49 100.0 RPL4-202 retained intron lung (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 276.00 0.12 0.63 100.0 RPL4-202 retained intron lung (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 736.00 0.31 1.67 100.0 RPL4-202 retained intron lung (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 1.00 0.00 0.00 100.0 ENST00000563103 lncRNA lung (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 536.00 6.85 1.22 100.0 RPL4-207 retained intron lung (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 3013.00 38.52 6.83 100.0 RPL4-207 retained intron lung (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 5716.00 2.59 12.96 81.52 ENST00000565336 lncRNA lung (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 193768.00 87.87 439.42 94.0 ENST00000565336 lncRNA lung (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 526.00 0.16 1.19 100.0 RBMX-210 retained intron lung (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 2530.00 0.78 5.74 100.0 RBMX-210 retained intron lung (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 5988.00 1.84 13.58 100.0 RBMX-210 retained intron lung (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 258267.00 79.46 585.69 84.23 RBMX-210 retained intron lung (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 3625.00 57.78 8.22 100.0 RPL4-214 retained intron lung (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 223.00 3.55 0.51 100.0 RPL4-214 retained intron lung (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 113.00 0.33 0.26 100.0 POLG-DT-202 lncRNA lung (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 11044.84 32.56 25.05 45.77 POLG-DT-202 lncRNA lung (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 13866.66 40.87 31.45 51.73 POLG-DT-202 lncRNA lung (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 2701.00 69.40 6.13 100.0 ENST00000570843 lncRNA lung (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 11803.00 80.30 26.77 100.0 MIR497HG-207 lncRNA lung (Tissue)