ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 4944.00 70.67 11.21 100.0 RPL5-205 retained intron lung (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 34.00 7.83 0.08 100.0 ZBED9-AS1-201 lncRNA lung (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 20494.00 91.65 46.48 100.0 RPS3A-206 retained intron lung (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 27942.00 95.17 63.37 100.0 COX7C-203 protein coding lung (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1390.00 0.89 3.15 100.0 RACK1-229 protein coding lung (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 33974.83 21.65 77.05 31.16 RACK1-229 protein coding lung (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 106689.57 67.97 241.95 77.65 RACK1-229 protein coding lung (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 8894.00 5.67 20.17 90.96 RACK1-229 protein coding lung (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 89345.00 82.14 202.61 97.12 RACK1-230 retained intron lung (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 17192.00 15.80 38.99 61.45 RACK1-230 retained intron lung (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 21.00 10.40 0.05 100.0 RNA5SP486-201 rRNA pseudogene lung (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 2535.00 86.34 5.75 100.0 SCARNA5-201 scaRNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 741.00 0.30 1.68 100.0 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 13693.00 5.63 31.05 100.0 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 541.00 0.22 1.23 100.0 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 102265.00 42.03 231.91 95.9 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 2075.00 0.85 4.71 100.0 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 35827.00 14.72 81.25 99.02 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 173.00 0.07 0.39 100.0 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 3173.00 1.30 7.20 57.43 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 25122.00 10.32 56.97 81.06 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 10502.00 4.32 23.82 70.59 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 1056.00 0.43 2.39 100.0 RNY4-201 misc RNA lung (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 158.00 0.06 0.36 34.27 RNY4-201 misc RNA lung (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 44354.00 82.32 100.59 89.89 MIR3142HG-201 lncRNA lung (Tissue)