ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 11.00 11.70 0.02 100.0 HCN2-201 protein coding lung (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 1251.00 91.38 2.84 100.0 SLC49A4-201 protein coding lung (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 940.00 41.89 2.13 100.0 ATP5MC3-201 protein coding lung (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 34.00 68.00 0.08 100.0 CDC25A-201 protein coding lung (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 1532.00 79.54 3.47 100.0 BLOC1S4-201 protein coding lung (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 384.00 7.37 0.87 100.0 ATAD5-201 protein coding lung (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 223.00 24.94 0.51 100.0 SLITRK5-201 protein coding lung (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 26.00 41.94 0.06 100.0 HASPIN-201 protein coding lung (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 772.00 78.78 1.75 100.0 PRR14L-201 protein coding lung (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 1115.00 97.81 2.53 100.0 ATG101-201 protein coding lung (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 900.00 77.45 2.04 100.0 PRICKLE1-201 protein coding lung (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 2376.00 97.10 5.39 99.29 MIR133A2-201 miRNA lung (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 7.00 21.21 0.02 100.0 PBLD-204 protein coding lung (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 360052.00 89.80 816.52 98.05 MIRLET7BHG-201 lncRNA lung (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 20407.00 5.09 46.28 88.24 MIRLET7BHG-201 lncRNA lung (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 828.00 1.53 1.88 48.34 MIR375-201 miRNA lung (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 52400.00 97.06 118.83 98.65 MIR375-201 miRNA lung (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 6122.00 59.55 13.88 100.0 MIR30E-201 miRNA lung (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 3021.00 29.39 6.85 100.0 MIR30E-201 miRNA lung (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 1059.00 51.43 2.40 100.0 MIR29A-201 miRNA lung (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 1280.00 83.82 2.90 100.0 MIR345-201 miRNA lung (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 216628.00 99.02 491.26 100.0 MIR16-2-201 miRNA lung (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 167.00 2.68 0.38 100.0 MIR340-201 miRNA lung (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 5688.00 91.36 12.90 100.0 MIR340-201 miRNA lung (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 5464.00 79.65 12.39 100.0 MIR107-201 miRNA lung (Tissue)