ENCFF001RMG
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | parietal lobe (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000AFY |
| Description: | Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000363286.1 | ENST00000363286.1_1_86_+ | 1–86 | 9215.00 | 18.51 | 39.17 | 100.0 | RNU5B-1-201 | snRNA | parietal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_55_116_+ | 55–116 | 1658.00 | 3.33 | 7.05 | 100.0 | RNU5B-1-201 | snRNA | parietal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_78_+ | 1–78 | 17251.00 | 34.66 | 73.32 | 83.39 | RNU5B-1-201 | snRNA | parietal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_69_+ | 1–69 | 439.00 | 0.88 | 1.87 | 100.0 | RNU5B-1-201 | snRNA | parietal lobe (Tissue) |
| ENST00000363293.1 | ENST00000363293.1_2_82_+ | 2–82 | 79061.00 | 91.47 | 336.04 | 96.83 | SNORD115-18-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363341.1 | ENST00000363341.1_1_32_+ | 1–32 | 32841.00 | 71.77 | 139.59 | 97.67 | RNY4P27-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000363341.1 | ENST00000363341.1_1_36_+ | 1–36 | 1647.00 | 3.60 | 7.00 | 67.72 | RNY4P27-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000363444.1 | ENST00000363444.1_74_99_+ | 74–99 | 1187.00 | 13.03 | 5.05 | 100.0 | Y_RNA.136-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000363608.1 | ENST00000363608.1_2_82_+ | 2–82 | 31700.00 | 59.98 | 134.74 | 100.0 | SNORD115-41-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363633.1 | ENST00000363633.1_2_82_+ | 2–82 | 11871.00 | 35.48 | 50.46 | 100.0 | SNORD115-5-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363723.1 | ENST00000363723.1_2_82_+ | 2–82 | 7270.00 | 49.78 | 30.90 | 100.0 | SNORD115-33-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363742.1 | ENST00000363742.1_4_67_+ | 4–67 | 9595.00 | 80.68 | 40.78 | 90.35 | SNORD114-25-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363762.1 | ENST00000363762.1_3_72_+ | 3–72 | 21693.00 | 93.61 | 92.20 | 100.0 | SNORD113-7-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363856.1 | ENST00000363856.1_2_82_+ | 2–82 | 5566.00 | 26.80 | 23.66 | 100.0 | SNORD115-8-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000363872.1 | ENST00000363872.1_74_98_+ | 74–98 | 568.00 | 49.18 | 2.41 | 100.0 | Y_RNA.181-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000363887.1 | ENST00000363887.1_2_82_+ | 2–82 | 18275.00 | 46.68 | 77.68 | 100.0 | SNORD115-16-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000364079.1 | ENST00000364079.1_2_82_+ | 2–82 | 4995.00 | 50.80 | 21.23 | 100.0 | SNORD115-32-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000364117.1 | ENST00000364117.1_2_82_+ | 2–82 | 11618.00 | 51.79 | 49.38 | 100.0 | SNORD115-30-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000364228.1 | ENST00000364228.1_1_39_+ | 1–39 | 695.00 | 2.05 | 2.95 | 100.0 | RNY1-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000364228.1 | ENST00000364228.1_1_32_+ | 1–32 | 7272.46 | 21.42 | 30.91 | 77.26 | RNY1-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000364228.1 | ENST00000364228.1_24_109_+ | 24–109 | 6688.00 | 19.70 | 28.43 | 100.0 | RNY1-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000364228.1 | ENST00000364228.1_1_30_+ | 1–30 | 1438.25 | 4.24 | 6.11 | 23.22 | RNY1-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000364228.1 | ENST00000364228.1_1_63_+ | 1–63 | 309.00 | 0.91 | 1.31 | 100.0 | RNY1-201 | misc RNA | parietal lobe (Tissue) |
| ENST00000364273.1 | ENST00000364273.1_2_82_+ | 2–82 | 8345.00 | 29.49 | 35.47 | 100.0 | SNORD115-42-201 | snoRNA | parietal lobe (Tissue) |
| ENST00000364315.1 | ENST00000364315.1_101_119_+ | 101–119 | 737.03 | 10.92 | 3.13 | 52.12 | RNA5SP202-201 | rRNA pseudogene | parietal lobe (Tissue) |