ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1221.00 4.74 5.19 86.05 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 2921.00 11.33 12.42 100.0 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 465.00 1.80 1.98 49.0 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 2145.00 8.32 9.12 78.37 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 235.00 0.91 1.00 100.0 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 1606.24 6.23 6.83 36.98 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 2203.00 8.55 9.36 79.7 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 588.00 2.28 2.50 66.52 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 65.00 0.25 0.28 100.0 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 594.00 2.30 2.52 65.71 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 800.00 3.10 3.40 40.8 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 242.21 0.94 1.03 46.58 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 472.00 1.83 2.01 54.95 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 2864.77 11.11 12.18 70.79 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 277.10 1.07 1.18 36.36 RNU5A-1-201 snRNA parietal lobe (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 1036.00 80.81 4.40 100.0 SNORD114-14-201 snoRNA parietal lobe (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 546.00 15.16 2.32 100.0 SNORD104-201 snoRNA parietal lobe (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 179.00 4.97 0.76 100.0 SNORD104-201 snoRNA parietal lobe (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 28689.00 57.64 121.94 95.75 SNORD115-9-201 snoRNA parietal lobe (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 2449.00 42.52 10.41 90.07 RNA5SP358-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 20.00 1.34 0.09 86.96 RNA5SP145-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 1392.00 33.77 5.92 100.0 Y_RNA.105-201 misc RNA parietal lobe (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 1440.00 21.03 6.12 100.0 RNY4P9-201 misc RNA parietal lobe (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1658.00 3.33 7.05 100.0 RNU5B-1-201 snRNA parietal lobe (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 1451.00 2.92 6.17 100.0 RNU5B-1-201 snRNA parietal lobe (Tissue)