ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 180.00 2.67 0.77 100.0 RNA5SP202-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 6.00 0.09 0.03 100.0 RNA5SP202-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 737.03 10.92 3.13 52.12 RNA5SP202-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 8.00 0.12 0.03 100.0 RNA5SP202-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 0.80 0.01 0.00 26.66 RNA5SP202-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 1227.00 18.18 5.22 100.0 RNA5SP202-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 15.00 0.22 0.06 100.0 RNA5SP202-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 2.58 0.04 0.01 64.45 RNA5SP202-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 1516.00 26.39 6.44 100.0 SNORD114-9-201 snoRNA parietal lobe (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 2516.00 43.80 10.69 100.0 SNORD114-9-201 snoRNA parietal lobe (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 305.00 3.04 1.30 100.0 Y_RNA.234-201 misc RNA parietal lobe (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 9117.00 66.95 38.75 100.0 SNORD115-23-201 snoRNA parietal lobe (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 3.00 0.40 0.01 100.0 RNA5SP141-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 91.00 17.47 0.39 100.0 SNORD114-15-201 snoRNA parietal lobe (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 370.00 29.84 1.57 100.0 ENST00000364722 snoRNA parietal lobe (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 11548.00 35.97 49.08 100.0 SNORD115-15-201 snoRNA parietal lobe (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 308.00 34.34 1.31 100.0 SNORD113-3-201 snoRNA parietal lobe (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 18648.00 64.41 79.26 100.0 SNORD52-201 snoRNA parietal lobe (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 1758.00 21.73 7.47 34.69 SNORD117-201 snoRNA parietal lobe (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 3310.00 40.90 14.07 71.61 SNORD117-201 snoRNA parietal lobe (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 562.00 4.35 2.39 100.0 SNORD114-3-201 snoRNA parietal lobe (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 145.00 1.12 0.62 100.0 SNORD114-3-201 snoRNA parietal lobe (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 9488.00 73.39 40.33 80.45 SNORD114-3-201 snoRNA parietal lobe (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 3.00 0.49 0.01 100.0 RNA5SP298-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 20582.00 54.67 87.48 100.0 SNORD115-38-201 snoRNA parietal lobe (Tissue)