ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 473.00 1.49 2.01 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 246.00 0.79 1.05 54.55 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 28.00 11.91 0.12 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 436.00 34.01 1.85 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 29804.00 82.43 126.68 98.66 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 19.00 0.37 0.08 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 424.00 8.19 1.80 61.99 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 181.00 44.47 0.77 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 18.00 4.06 0.08 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 33.00 1.36 0.14 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 4127.00 83.05 17.54 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 194.00 84.35 0.82 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 7734.00 69.21 32.87 98.95 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 115.00 1.03 0.49 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 334.00 1.05 1.42 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 3809.00 70.47 16.19 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 117.00 4.87 0.50 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 447.00 10.20 1.90 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 252.00 5.75 1.07 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 42.00 0.96 0.18 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 1.00 1.49 0.00 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA parietal lobe (Tissue)