ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 15292.00 23.02 65.00 92.32 RPL23A-208 retained intron parietal lobe (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 98.93 0.15 0.42 68.7 RPL23A-208 retained intron parietal lobe (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 41.21 0.06 0.18 42.93 RPL23A-208 retained intron parietal lobe (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 50164.00 75.53 213.22 88.98 RPL23A-208 retained intron parietal lobe (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 8902.00 6.05 37.84 29.47 RPL17-211 retained intron parietal lobe (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 299.00 0.20 1.27 100.0 RPL17-211 retained intron parietal lobe (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 93497.00 63.55 397.40 97.21 RPL17-211 retained intron parietal lobe (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 34870.00 23.70 148.21 97.36 RPL17-211 retained intron parietal lobe (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 4647.00 3.16 19.75 42.96 RPL17-211 retained intron parietal lobe (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 246.00 13.49 1.05 100.0 ENST00000582320 lncRNA parietal lobe (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 118.00 6.47 0.50 100.0 ENST00000582320 lncRNA parietal lobe (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 930.00 50.99 3.95 81.08 ENST00000582320 lncRNA parietal lobe (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 304.00 0.96 1.29 100.0 RPL17-214 retained intron parietal lobe (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 11448.62 36.33 48.66 45.03 RPL17-214 retained intron parietal lobe (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 16639.46 52.80 70.72 57.29 RPL17-214 retained intron parietal lobe (Tissue)
ENST00000583861.1 ENST00000583861.1_27_62_+ 27–62 1139.00 0.11 4.84 100.0 SNORD43-201 snoRNA parietal lobe (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 1334.00 0.13 5.67 100.0 SNORD43-201 snoRNA parietal lobe (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 1032205.00 98.85 4387.29 99.89 SNORD43-201 snoRNA parietal lobe (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 126.00 36.84 0.54 100.0 MIR151B-201 miRNA parietal lobe (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 133.00 1.64 0.57 100.0 SNORD3A-201 snoRNA parietal lobe (Tissue)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 28380.00 90.83 120.63 100.0 SNORD92-201 snoRNA parietal lobe (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 3013.00 63.11 12.81 100.0 NSRP1-214 protein coding parietal lobe (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 1261.00 26.41 5.36 85.72 NSRP1-214 protein coding parietal lobe (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 193.00 10.70 0.82 61.86 MIR23AHG-201 lncRNA parietal lobe (Tissue)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 15.00 0.83 0.06 100.0 MIR23AHG-201 lncRNA parietal lobe (Tissue)