ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 2380.00 51.74 10.12 87.02 ENST00000565336 lncRNA parietal lobe (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 1063.00 23.11 4.52 70.3 ENST00000565336 lncRNA parietal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 3126.00 0.68 13.29 100.0 RBMX-210 retained intron parietal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 662.00 0.14 2.81 100.0 RBMX-210 retained intron parietal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 2178.00 0.48 9.26 100.0 RBMX-210 retained intron parietal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 410979.00 89.97 1746.83 93.91 RBMX-210 retained intron parietal lobe (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 1021.00 16.90 4.34 100.0 RPL4-214 retained intron parietal lobe (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 2930.00 48.49 12.45 100.0 RPL4-214 retained intron parietal lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 4290.63 25.19 18.24 43.22 POLG-DT-202 lncRNA parietal lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 5694.09 33.43 24.20 66.47 POLG-DT-202 lncRNA parietal lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 1004.00 5.89 4.27 100.0 POLG-DT-202 lncRNA parietal lobe (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 369.00 34.88 1.57 100.0 ENST00000570843 lncRNA parietal lobe (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 1934.00 59.53 8.22 100.0 MIR497HG-207 lncRNA parietal lobe (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 44098.00 99.60 187.43 99.81 MIR22HG-212 lncRNA parietal lobe (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 356.00 0.53 1.51 58.84 SNORD53B-201 snoRNA parietal lobe (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 57599.00 85.38 244.82 87.51 SNORD53B-201 snoRNA parietal lobe (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 249.00 0.37 1.06 41.16 SNORD53B-201 snoRNA parietal lobe (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 204.00 87.55 0.87 100.0 ENST00000578036 lncRNA parietal lobe (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 6493.00 92.40 27.60 100.0 RPL23A-207 protein coding parietal lobe (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 1464.00 91.04 6.22 100.0 MIR744-201 miRNA parietal lobe (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 29.00 74.36 0.12 100.0 MIR378C-201 miRNA parietal lobe (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 242.00 42.09 1.03 75.62 MIR142HG-201 lncRNA parietal lobe (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 215.00 37.39 0.91 78.75 MIR142HG-201 lncRNA parietal lobe (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 12.00 2.09 0.05 100.0 MIR142HG-201 lncRNA parietal lobe (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 375.00 5.05 1.59 100.0 SNORD3C-201 snoRNA parietal lobe (Tissue)