ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 258.00 14.31 1.10 89.58 MIR23AHG-201 lncRNA parietal lobe (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 575.00 31.89 2.44 88.19 MIR23AHG-201 lncRNA parietal lobe (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 409.00 22.68 1.74 82.29 MIR23AHG-201 lncRNA parietal lobe (Tissue)
ENST00000590797.5 ENST00000590797.5_2254_2275_+ 2254–2275 1.00 14.29 0.00 100.0 MIR122HG-201 lncRNA parietal lobe (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 1174.00 61.47 4.99 100.0 ODAD3-204 nonsense mediated decay parietal lobe (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 246.00 1.48 1.05 100.0 VMP1-217 retained intron parietal lobe (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 38.00 0.23 0.16 100.0 VMP1-217 retained intron parietal lobe (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 9681.00 58.34 41.15 63.67 VMP1-217 retained intron parietal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 238.00 0.05 1.01 100.0 C19orf48P-203 retained intron parietal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 372860.95 74.95 1584.81 82.75 C19orf48P-203 retained intron parietal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 126081.01 25.34 535.90 25.75 C19orf48P-203 retained intron parietal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 2493.00 0.50 10.60 90.13 C19orf48P-203 retained intron parietal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 43.00 0.01 0.18 100.0 C19orf48P-203 retained intron parietal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 6.00 0.00 0.03 100.0 C19orf48P-203 retained intron parietal lobe (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 1.00 100.00 0.00 100.0 ENST00000597420 lncRNA parietal lobe (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 55.00 1.55 0.23 100.0 RPS11-206 retained intron parietal lobe (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 3023.00 85.13 12.85 100.0 RPS11-206 retained intron parietal lobe (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 4653.00 58.14 19.78 60.72 CARMN-209 lncRNA parietal lobe (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 1867.00 44.75 7.94 100.0 ENST00000602478 lncRNA parietal lobe (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 2689.00 58.33 11.43 100.0 SNORD114-21-201 snoRNA parietal lobe (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 134.00 2.91 0.57 100.0 SNORD114-21-201 snoRNA parietal lobe (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 10252.00 34.12 43.58 100.0 SNORD115-40-201 snoRNA parietal lobe (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 10496.00 98.51 44.61 100.0 MIR98-201 miRNA parietal lobe (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 17163.00 92.29 72.95 100.0 SNORD113-5-201 snoRNA parietal lobe (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 6339.00 92.91 26.94 100.0 MIR15A-201 miRNA parietal lobe (Tissue)